STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41321.1Von Willebrand factor type A domain-containing protein. (449 aa)    
Predicted Functional Partners:
EFL41322.1
Conserved hypothetical protein.
 
     0.939
EFL41320.1
FHA domain-containing protein.
 
     0.893
EFL42076.1
Magnesium chelatase.
  
 0.829
EFL41324.1
Conserved hypothetical protein; Truncated CDS.
 
     0.805
EFL41323.1
Non-specific serine/threonine protein kinase.
 
   
 0.788
EFL41326.1
Secreted protein.
 
     0.773
EFL38440.1
Non-specific serine/threonine protein kinase.
 
   
 0.705
EFL41325.1
Sugar-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  
  0.694
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
   
 
  0.652
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
   
 
  0.652
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.