STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41326.1Secreted protein. (469 aa)    
Predicted Functional Partners:
EFL41325.1
Sugar-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.988
EFL41323.1
Non-specific serine/threonine protein kinase.
 
  
 0.969
EFL38440.1
Non-specific serine/threonine protein kinase.
 
  
 0.907
EFL41324.1
Conserved hypothetical protein; Truncated CDS.
 
     0.855
EFL41320.1
FHA domain-containing protein.
 
     0.802
EFL41321.1
Von Willebrand factor type A domain-containing protein.
 
     0.773
EFL41322.1
Conserved hypothetical protein.
 
     0.694
EFL40428.1
Serine/threonine phosphatase.
  
     0.630
EFL37930.1
Secreted protein.
  
  
 0.628
EFL39618.1
Chorismate mutase.
  
     0.628
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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