STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41338.1Drug/metabolite transporter (DMT) family membrane protein. (258 aa)    
Predicted Functional Partners:
EFL41337.1
Transcriptional regulator PecS.
 
   
 0.959
EFL40573.1
MarR-family transcriptional regulator.
 
   
 0.784
EFL42724.1
MarR-family regulatory protein.
 
   
 0.772
EFL40933.1
Transcriptional regulator PecS.
 
   
 0.768
EFL39787.1
Transcriptional regulator PecS.
  
     0.738
EFL37805.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.511
EFL42284.1
Glycine betaine/proline ABC transporter, permease/substrate-binding protein.
   
 
  0.492
pheT
phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
   0.436
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.