STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41344.1Serine protease; Belongs to the peptidase S8 family. (1103 aa)    
Predicted Functional Partners:
EFL41972.1
Zinc-binding carboxypeptidase.
  
 0.791
EFL41345.1
MutT/nudix family protein; Belongs to the Nudix hydrolase family.
 
     0.781
EFL41346.1
Tat (twin-arginine translocation) pathway signal sequence domain-containing protein.
 
     0.715
EFL41347.1
Conserved hypothetical protein.
 
     0.714
EFL41339.1
Aminopeptidase N.
    
 0.599
EFL39469.1
Regulatory protein.
 
   0.570
EFL42180.1
GNAT family acetyltransferase.
  
     0.561
EFL38607.1
Conserved hypothetical protein.
       0.552
EFL39416.1
Zinc carboxypeptidase.
  
  
  0.552
EFL41348.1
Aminopeptidase N.
    
 0.544
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.