STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41351.1BioY family protein. (172 aa)    
Predicted Functional Partners:
EFL41586.1
Integral membrane protein.
  
 0.970
EFL38454.1
Cobalt import ATP-binding protein CbiO; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
   
 0.943
EFL40897.1
Cobalt ABC transporter, ATP-binding protein.
   
 0.943
EFL38453.1
Cobalt ABC transporter, permease CbiQ.
  
 0.881
EFL40898.1
Cobalt ABC transporter, permease CbiQ.
  
 0.881
EFL41584.1
Integral membrane protein.
   
 0.823
EFL41585.1
ABC transporter ATP-binding protein.
    
  0.718
EFL41350.1
Gamma-aminobutyrate permease.
  
    0.559
EFL40841.1
Superoxide dismutase.
  
    0.552
EFL41353.1
Ribose 5-phosphate isomerase.
       0.552
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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