STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41393.1Group 2 family glycosyl transferase. (387 aa)    
Predicted Functional Partners:
ispD-2
Pyrophosphorylase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.734
EFL41298.1
Transferase.
 
  
 0.717
EFL43056.1
Conserved hypothetical protein.
  
  
 
0.692
EFL41088.1
Integral membrane protein.
 
 
 0.678
EFL38549.1
Glucosyltransferase.
 
  
 0.631
EFL41058.1
CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase.
 
  
  0.628
EFL37829.1
ABC transporter ATP-binding protein.
 
  
 0.611
EFL41059.1
ABC transporter ATP-binding protein.
 
  
 0.599
EFL38566.1
Glycosyl transferase.
 
     0.598
EFL41087.1
Glycosyl transferase, group 2.
 
 
 0.590
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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