STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41419.1Regulatory protein. (684 aa)    
Predicted Functional Partners:
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
 
 
 0.878
EFL41420.1
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.854
EFL40046.1
anti-sigma-B factor antagonist (Anti-anti-sigma-B factor); Belongs to the anti-sigma-factor antagonist family.
 
   0.823
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
 
 
 0.822
EFL37699.1
Stage II sporulation protein E (SpoIIE).
  
     0.771
EFL40991.1
Conserved hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
 
   0.769
EFL43075.1
Conserved hypothetical protein.
  
     0.768
EFL37442.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.756
EFL37443.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.756
EFL41418.1
long-chain-fatty-acid-CoA ligase.
       0.748
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.