Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL41427.1Conserved hypothetical protein; Degrades oligopeptides; Belongs to the peptidase S41B family. (1071 aa)    
Predicted Functional Partners:
EFL41426.1
Conserved hypothetical protein.
     
 0.684
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
   
   0.659
EFL41430.1
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
   
   0.659
EFL41428.1
HIT family protein.
       0.639
EFL38023.1
Tetratricopeptide repeat family protein.
   
 
 0.638
EFL40832.1
Conserved hypothetical protein.
   
 
 0.638
EFL41868.1
Conserved hypothetical protein.
  
 
   0.611
EFL41711.1
Alpha-amylase.
    
  0.603
EFL39481.1
Membrane protein.
  
 
   0.602
EFL41923.1
Tetratricopeptide repeat-containing protein.
    
   0.548
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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