Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFL41176.1 | EFL41428.1 | SSRG_03980 | SSRG_04232 | DEAD/DEAH family helicase. | HIT family protein. | 0.696 |
| EFL41176.1 | rpoB | SSRG_03980 | SSRG_02529 | DEAD/DEAH family helicase. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.984 |
| EFL41176.1 | rpoC | SSRG_03980 | SSRG_02528 | DEAD/DEAH family helicase. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.878 |
| EFL41176.1 | rpoZ | SSRG_03980 | SSRG_05260 | DEAD/DEAH family helicase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.984 |
| EFL41425.1 | EFL41426.1 | SSRG_04229 | SSRG_04230 | RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Conserved hypothetical protein. | 0.750 |
| EFL41425.1 | EFL41428.1 | SSRG_04229 | SSRG_04232 | RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | HIT family protein. | 0.728 |
| EFL41425.1 | EFL41430.1 | SSRG_04229 | SSRG_04234 | RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | 0.689 |
| EFL41425.1 | dnaJ-2 | SSRG_04229 | SSRG_04227 | RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.871 |
| EFL41425.1 | rnz | SSRG_04229 | SSRG_04233 | RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.690 |
| EFL41426.1 | EFL41425.1 | SSRG_04230 | SSRG_04229 | Conserved hypothetical protein. | RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.750 |
| EFL41426.1 | EFL41428.1 | SSRG_04230 | SSRG_04232 | Conserved hypothetical protein. | HIT family protein. | 0.756 |
| EFL41426.1 | EFL41430.1 | SSRG_04230 | SSRG_04234 | Conserved hypothetical protein. | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | 0.756 |
| EFL41426.1 | dnaJ-2 | SSRG_04230 | SSRG_04227 | Conserved hypothetical protein. | Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.703 |
| EFL41426.1 | rnz | SSRG_04230 | SSRG_04233 | Conserved hypothetical protein. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.756 |
| EFL41428.1 | EFL41176.1 | SSRG_04232 | SSRG_03980 | HIT family protein. | DEAD/DEAH family helicase. | 0.696 |
| EFL41428.1 | EFL41425.1 | SSRG_04232 | SSRG_04229 | HIT family protein. | RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.728 |
| EFL41428.1 | EFL41426.1 | SSRG_04232 | SSRG_04230 | HIT family protein. | Conserved hypothetical protein. | 0.756 |
| EFL41428.1 | EFL41430.1 | SSRG_04232 | SSRG_04234 | HIT family protein. | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | 0.872 |
| EFL41428.1 | EFL43231.1 | SSRG_04232 | SSRG_06035 | HIT family protein. | ferredoxin-NADP reductase. | 0.714 |
| EFL41428.1 | dnaJ-2 | SSRG_04232 | SSRG_04227 | HIT family protein. | Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.692 |
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