STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41433.1Mandelate racemase/muconate lactonizing enzyme family protein. (455 aa)    
Predicted Functional Partners:
EFL43427.1
5-dehydro-4-deoxyglucarate dehydratase (5-keto-4-deoxy-glucarate dehydratase) (KDGDH); Belongs to the DapA family.
 
  
 0.944
EFL42027.1
5-dehydro-4-deoxyglucarate dehydratase 1 (5-keto-4-deoxy-glucarate dehydratase 1) (KDGDH 1); Belongs to the DapA family.
 
  
 0.942
EFL42904.1
Mandelate racemase/muconate lactonizing enzyme family protein.
 
  
 
0.798
EFL41432.1
IclR-family transcriptional regulator.
 
     0.785
EFL39508.1
Aldehyde dehydrogenase; Overlaps another CDS with the same product name.
     
  0.772
EFL42204.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.772
EFL41434.1
Sugar kinase.
    
  0.675
EFL39586.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.666
EFL40018.1
Benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.666
EFL43297.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.666
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.