STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41459.1Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (280 aa)    
Predicted Functional Partners:
EFL39793.1
Trans-hexaprenyltranstransferase; Belongs to the FPP/GGPP synthase family.
 
 
 0.977
EFL37826.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 
 0.963
EFL41660.1
Trans-hexaprenyltranstransferase; Belongs to the FPP/GGPP synthase family.
 
 
 0.963
EFL38135.1
Polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.956
EFL38189.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 
 0.955
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
  
  
 0.939
EFL41458.1
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
  
 0.926
EFL38835.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
  
 0.925
uppP
Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
     
 0.908
EFL37827.1
Squalene synthase HpnD.
   
 
 0.904
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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