STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41464.1ABC-transporter metal-binding lipoprotein. (338 aa)    
Predicted Functional Partners:
EFL41462.1
ABC zinc/manganese transport system permease.
 
 
 0.999
EFL41463.1
ABC-type Mn/Zn transport system ATPase component; Unextendable partial coding region.
 
 
 0.998
EFL43307.1
ABC-type Mn2+ transport system, permease component.
 
 
 0.981
EFL43306.1
Cation ABC transporter, ATP-binding protein.
 
 
 0.937
EFL41461.1
Ferric uptake regulation protein; Belongs to the Fur family.
 
  
 0.869
EFL38635.1
Ferric citrate transport system ATP-binding protein.
  
 
 0.851
EFL43434.1
CobW/P47K domain-containing protein.
  
  
 0.797
rpmB-2
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.782
glyQS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.773
EFL38616.1
CobW/P47K family protein.
  
  
 0.693
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.