STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41494.1alpha-N-arabinofuranosidase. (501 aa)    
Predicted Functional Partners:
EFL41514.1
Glycoside Hydrolase family 43.
 
  
 0.895
EFL41491.1
Sugar transporter sugar binding protein.
 
    0.888
EFL42669.1
Xylose isomerase.
 
  
 0.887
EFL42917.1
Endo-1,4-beta-xylanase Z.
 
  
 0.832
EFL38250.1
Sorbitol oxidase.
  
  
  0.801
EFL38661.1
Oxidoreductase, FAD-binding.
     
  0.772
EFL37773.1
Galactosidase.
  
 
 0.751
EFL43147.1
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
 
   
 0.717
EFL41492.1
Sugar transporter membrane protein.
  
    0.701
EFL41493.1
ABC-type sugar transport system, permease component.
  
    0.699
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.