Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41495.1Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family. (707 aa)    
Predicted Functional Partners:
EFL37816.1
Alpha-galactosidase C.
    
 0.874
EFL40204.1
Aldose-1-epimerase.
  
 
 0.855
EFL41516.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.855
EFL41529.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.855
EFL38252.1
Glycosyl hydrolase, family 2; Unextendable partial coding region.
   
 0.790
EFL38253.1
Beta galactosidase small subunit.
   
 0.790
EFL37890.1
6-phospho-beta-glucosidase.
    
 0.748
EFL41328.1
Glycosyl hydrolase, family 4.
    
 0.748
EFL38061.1
Sialidase.
  
 0.740
EFL37774.1
Beta-galactosidase; Truncated CDS.
    
  0.715
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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