Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41496.1Conserved hypothetical protein. (328 aa)    
Predicted Functional Partners:
EFL41497.1
Secreted protein.
       0.695
EFL41498.1
Secreted protein.
       0.523
EFL37930.1
Secreted protein.
 
     0.505
EFL41510.1
Membrane protein.
  
     0.475
EFL37552.1
TetR family transcriptional regulator.
  
     0.465
EFL40829.1
Conserved hypothetical protein.
  
     0.456
EFL41165.1
Glyoxalase.
  
    0.453
EFL38455.1
Secreted hydrolase.
  
     0.452
EFL41512.1
Integral membrane protein.
  
     0.431
EFL42186.1
Secreted hydrolase.
  
     0.424
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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