STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41505.1Virulence factor Mce family protein; Overlaps another CDS with the same product name. (358 aa)    
Predicted Functional Partners:
EFL41502.1
ABC-transporter integral membrane protein.
 
 0.999
EFL41503.1
Mce family protein.
 
 0.999
EFL41500.1
ABC transporter, ATP-binding protein.
 
 0.998
EFL41501.1
YrbE family protein.
 
 0.998
EFL41506.1
Virulence factor Mce family protein; Overlaps another CDS with the same product name.
 
0.998
EFL41507.1
Virulence factor Mce family protein; Overlaps another CDS with the same product name.
 
0.997
EFL41504.1
Virulence factor Mce family protein; Overlaps another CDS with the same product name.
 
0.993
EFL41508.1
Virulence factor mce family protein; Overlaps another CDS with the same product name.
 
 
 0.992
EFL41511.1
Membrane protein.
 
    0.891
EFL41512.1
Integral membrane protein.
 
    0.883
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.