Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41513.1Secreted protein. (417 aa)    
Predicted Functional Partners:
EFL41512.1
Integral membrane protein.
       0.643
EFL41506.1
Virulence factor Mce family protein; Overlaps another CDS with the same product name.
 
     0.485
EFL41514.1
Glycoside Hydrolase family 43.
       0.462
EFL41508.1
Virulence factor mce family protein; Overlaps another CDS with the same product name.
 
     0.461
EFL41507.1
Virulence factor Mce family protein; Overlaps another CDS with the same product name.
 
     0.446
EFL41511.1
Membrane protein.
       0.442
EFL41505.1
Virulence factor Mce family protein; Overlaps another CDS with the same product name.
 
     0.440
EFL41510.1
Membrane protein.
       0.434
EFL41503.1
Mce family protein.
 
     0.430
EFL41502.1
ABC-transporter integral membrane protein.
 
     0.413
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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