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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41519.1Sugar ABC transporter, periplasmic sugar-binding protein. (370 aa)    
Predicted Functional Partners:
EFL41517.1
Sugar ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
EFL41518.1
Sugar ABC transporter, ATP-binding protein.
 
 0.957
EFL38405.1
Sugar ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.862
EFL41516.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
     0.824
EFL41523.1
Membrane protein.
     
 0.781
EFL41520.1
Conserved hypothetical protein.
       0.765
EFL41521.1
Dehydrogenase.
       0.712
EFL41522.1
Dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.712
EFL41515.1
Aminotransferase; Unextendable partial coding region.
       0.700
EFL38406.1
Sugar ABC transporter, ATP-binding protein.
 
 0.633
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.