Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL41522.1Dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (387 aa)    
Predicted Functional Partners:
EFL41520.1
Conserved hypothetical protein.
 
     0.911
EFL41521.1
Dehydrogenase.
 
     0.904
EFL41523.1
Membrane protein.
       0.742
EFL41519.1
Sugar ABC transporter, periplasmic sugar-binding protein.
       0.695
EFL41517.1
Sugar ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
       0.689
EFL41516.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
       0.666
EFL42904.1
Mandelate racemase/muconate lactonizing enzyme family protein.
  
  
 
0.660
EFL37847.1
Conserved hypothetical protein.
   
   0.593
EFL38055.1
Conserved hypothetical protein.
   
   0.593
EFL41433.1
Mandelate racemase/muconate lactonizing enzyme family protein.
  
  
 
0.511
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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