Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41528.1Secreted protein. (300 aa)    
Predicted Functional Partners:
EFL39950.1
Acetoin utilization protein AcuC.
    
   0.813
EFL40282.1
Extracellular small neutral protease; Belongs to the peptidase M7 family.
  
 
 
 0.799
EFL43123.1
Extracellular small neutral protease.
  
 
 
 0.787
EFL42246.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
   0.784
EFL39448.1
Sel1 repeat superfamily protein.
 
 
   0.779
EFL40793.1
Calcium binding protein.
  
 
   0.779
EFL41929.1
Transport integral membrane protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.753
EFL38992.1
Calcium-binding protein.
    
   0.751
EFL39163.1
Conserved hypothetical protein.
  
 
   0.738
EFL40363.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.737
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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