Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL39736.1 | EFL39737.1 | SSRG_02540 | SSRG_02541 | MaoC family protein. | Conserved hypothetical protein; Belongs to the UPF0336 family. | 0.999 |
EFL39736.1 | EFL41535.1 | SSRG_02540 | SSRG_04339 | MaoC family protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.616 |
EFL39736.1 | EFL41536.1 | SSRG_02540 | SSRG_04340 | MaoC family protein. | Conserved hypothetical protein. | 0.585 |
EFL39737.1 | EFL39736.1 | SSRG_02541 | SSRG_02540 | Conserved hypothetical protein; Belongs to the UPF0336 family. | MaoC family protein. | 0.999 |
EFL39737.1 | EFL40693.1 | SSRG_02541 | SSRG_03497 | Conserved hypothetical protein; Belongs to the UPF0336 family. | Conserved hypothetical protein. | 0.432 |
EFL39737.1 | EFL41535.1 | SSRG_02541 | SSRG_04339 | Conserved hypothetical protein; Belongs to the UPF0336 family. | Malonyl CoA-acyl carrier protein transacylase. | 0.584 |
EFL39737.1 | EFL41536.1 | SSRG_02541 | SSRG_04340 | Conserved hypothetical protein; Belongs to the UPF0336 family. | Conserved hypothetical protein. | 0.602 |
EFL39737.1 | crgA | SSRG_02541 | SSRG_03165 | Conserved hypothetical protein; Belongs to the UPF0336 family. | WhiP protein; Involved in cell division; Belongs to the CrgA family. | 0.401 |
EFL40693.1 | EFL39737.1 | SSRG_03497 | SSRG_02541 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0336 family. | 0.432 |
EFL40693.1 | EFL41536.1 | SSRG_03497 | SSRG_04340 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.600 |
EFL40693.1 | tatB | SSRG_03497 | SSRG_02092 | Conserved hypothetical protein. | Sec-independent protein translocase TatB-like protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.616 |
EFL41532.1 | EFL41535.1 | SSRG_04336 | SSRG_04339 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Malonyl CoA-acyl carrier protein transacylase. | 0.998 |
EFL41532.1 | EFL41536.1 | SSRG_04336 | SSRG_04340 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Conserved hypothetical protein. | 0.677 |
EFL41532.1 | EFL41537.1 | SSRG_04336 | SSRG_04341 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | YhhW family protein; Belongs to the pirin family. | 0.656 |
EFL41532.1 | acpP | SSRG_04336 | SSRG_04337 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.965 |
EFL41532.1 | fabH-2 | SSRG_04336 | SSRG_04338 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.998 |
EFL41535.1 | EFL39736.1 | SSRG_04339 | SSRG_02540 | Malonyl CoA-acyl carrier protein transacylase. | MaoC family protein. | 0.616 |
EFL41535.1 | EFL39737.1 | SSRG_04339 | SSRG_02541 | Malonyl CoA-acyl carrier protein transacylase. | Conserved hypothetical protein; Belongs to the UPF0336 family. | 0.584 |
EFL41535.1 | EFL41532.1 | SSRG_04339 | SSRG_04336 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.998 |
EFL41535.1 | EFL41536.1 | SSRG_04339 | SSRG_04340 | Malonyl CoA-acyl carrier protein transacylase. | Conserved hypothetical protein. | 0.903 |
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