STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41561.1ATP/GTP-binding protein. (388 aa)    
Predicted Functional Partners:
EFL41560.1
Bacterial stress protein.
 
     0.945
EFL41562.1
Conserved hypothetical protein.
 
   
 0.907
EFL41563.1
Conserved hypothetical protein.
 
     0.899
EFL39367.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.842
EFL42020.1
Stress protein.
 
     0.799
EFL41955.1
Tellurium resistance protein TerZ.
 
     0.797
EFL41559.1
Conserved hypothetical protein.
 
     0.792
EFL42776.1
Conserved hypothetical protein.
 
     0.792
EFL40259.1
Tellurium resistance protein TerD.
 
     0.787
EFL40426.1
Bacterial stress protein.
 
     0.787
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.