Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41563.1Conserved hypothetical protein. (271 aa)    
Predicted Functional Partners:
EFL41562.1
Conserved hypothetical protein.
   0.988
EFL41561.1
ATP/GTP-binding protein.
 
     0.894
EFL41560.1
Bacterial stress protein.
 
     0.890
EFL42776.1
Conserved hypothetical protein.
 
     0.800
EFL42020.1
Stress protein.
 
     0.792
EFL40426.1
Bacterial stress protein.
 
     0.781
EFL41955.1
Tellurium resistance protein TerZ.
 
     0.781
EFL40683.1
Tellurium resistance protein TerE.
 
     0.769
EFL41556.1
Tellurium resistance protein TerE.
 
     0.769
EFL40259.1
Tellurium resistance protein TerD.
 
     0.768
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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