STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41565.1Conserved hypothetical protein; Truncated CDS; unextendable partial coding region. (233 aa)    
Predicted Functional Partners:
EFL41564.1
Membrane protein.
       0.769
EFL39610.1
Two-component system sensor kinase.
  
  
 0.720
EFL42171.1
Membrane protein.
  
 
   0.645
EFL39366.1
Conserved hypothetical protein.
  
  
 0.615
EFL41161.1
Conserved hypothetical protein.
  
  
 0.615
EFL40419.1
Membrane protein.
  
  
 0.606
EFL41755.1
Transcription regulator.
  
  
 0.600
EFL39898.1
Conserved hypothetical protein.
 
 
  0.591
EFL39400.1
Secreted protein.
    
   0.590
EFL39401.1
Secreted protein.
    
   0.590
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.