STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41571.1Integral membrane protein. (193 aa)    
Predicted Functional Partners:
EFL41572.1
2-deoxyglucose-6-phosphate phosphatase.
       0.746
EFL41570.1
S-layer domain-containing protein.
       0.572
EFL37509.1
Calcium-translocating P-type ATPase, PMCA-type; Truncated CDS; unextendable partial coding region.
  
 
 
 0.547
EFL37745.1
Calcium-translocating P-type ATPase, PMCA-type.
  
 
 
 0.540
EFL40739.1
E1-E2 family cation-transporting ATPase.
    
 
 0.480
EFL37407.1
Hydantoin utilization protein A.
      
 0.472
EFL41201.1
Decarboxylase; Overlaps another CDS with the same product name.
      
 0.472
EFL37549.1
Ferric uptake regulation protein; Belongs to the Fur family.
     
 0.434
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.