Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41578.1Conserved hypothetical protein; Truncated CDS; unextendable partial coding region. (130 aa)    
Predicted Functional Partners:
EFL41579.1
Conserved hypothetical protein.
       0.590
EFL37689.1
Conserved hypothetical protein.
       0.531
EFL39538.1
Conserved hypothetical protein.
  
     0.452
EFL39544.1
Conserved hypothetical protein.
  
     0.446
EFL39540.1
Conserved hypothetical protein.
  
     0.445
EFL39537.1
Transferase.
  
     0.427
EFL42562.1
Conserved hypothetical protein.
  
     0.416
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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