STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41584.1Integral membrane protein. (289 aa)    
Predicted Functional Partners:
EFL41586.1
Integral membrane protein.
 
 0.988
EFL41585.1
ABC transporter ATP-binding protein.
 
 0.985
EFL38453.1
Cobalt ABC transporter, permease CbiQ.
  
 0.879
EFL40898.1
Cobalt ABC transporter, permease CbiQ.
  
 0.879
EFL41351.1
BioY family protein.
   
 0.823
EFL41587.1
Secreted protein; Overlaps another CDS with the same product name.
 
     0.744
EFL41583.1
Secreted protein.
       0.734
EFL42069.1
precorrin-3B C(17)-methyltransferase.
  
 
 0.711
EFL42362.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
    
  0.654
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.619
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.