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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41590.1TetR family transcriptional regulator. (219 aa)    
Predicted Functional Partners:
EFL41591.1
Glycosyl transferase; Truncated CDS.
 
     0.827
EFL41592.1
Methyltransferase type 11.
 
 
   0.757
EFL41593.1
Conserved hypothetical protein.
 
     0.757
EFL40784.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.506
EFL37799.1
TetR family transcriptional regulator.
  
   
 0.479
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
  
 0.468
EFL42565.1
Conserved hypothetical protein.
  
     0.463
EFL41602.1
MaoC family protein.
  
   
 0.451
EFL41589.1
Glycosyl hydrolase family 10.
       0.435
EFL41673.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.431
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.