STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41615.1Conserved hypothetical protein. (118 aa)    
Predicted Functional Partners:
EFL41614.1
roadblock/LC7 domain-containing protein.
 
     0.949
EFL41613.1
Sensor kinase.
 
 
 0.909
EFL41617.1
Cytochrome P450.
 
 
   0.904
EFL41616.1
ATP/GTP-binding protein.
 
   
 0.889
EFL42738.1
Electron transfer flavoprotein, alpha subunit.
  
 
 0.849
EFL42737.1
Electron transfer flavoprotein, beta subunit.
  
 
 0.827
EFL37849.1
Fatty oxidation complex, alpha subunit.
  
 0.822
EFL38396.1
Fatty acid oxidation complex alpha-subunit.
  
 0.822
EFL43338.1
Fatty oxidation complex, alpha subunit.
  
 0.822
EFL42276.1
roadblock/LC7 domain-containing protein.
 
   
 0.804
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.