STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41645.1Isomerase. (243 aa)    
Predicted Functional Partners:
EFL41644.1
Conserved hypothetical protein.
       0.833
EFL41647.1
Polyketide-8 synthase acyl carrier protein 1 (ACP 1).
 
     0.795
EFL41654.1
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ.
 
     0.765
EFL41653.1
Conserved hypothetical protein.
 
     0.755
EFL41646.1
FAD dependent oxidoreductase.
 
     0.753
EFL41643.1
PE-PGRS family protein.
       0.705
EFL41652.1
Polyketide-8 synthase acyl carrier protein 2 (ACP 2).
       0.647
EFL41655.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.642
EFL41651.1
3-oxoacyl-ACP synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.622
EFL39448.1
Sel1 repeat superfamily protein.
  
     0.590
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.