STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41657.1Antibiotic resistance ATP-binding protein. (332 aa)    
Predicted Functional Partners:
EFL41658.1
Multidrug ABC transporter permease.
 
 
 0.971
EFL37365.1
Daunorubicin resistance transmembrane protein.
  
 
 0.854
EFL39474.1
ABC transporter, permease component.
  
 
 0.854
EFL40015.1
ABC-2 type transporter.
  
 
 0.854
EFL41688.1
ABC-transporter, transmembrane component.
  
 
 0.854
EFL42192.1
ABC transporter, permease component.
  
 
 0.853
EFL39896.1
ABC transporter, permease.
 
 
 0.831
EFL40316.1
Daunorubicin resistance transmembrane protein.
  
  
  0.828
EFL39071.1
ABC transporter, integral membrane subunit.
  
 
  0.800
EFL40190.1
ABC transporter membrane-spanning protein; Truncated CDS.
 
 
 0.688
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.