STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41662.1Ubiquinone biosynthesis protein AarF. (646 aa)    
Predicted Functional Partners:
EFL41661.1
Membrane efflux protein.
       0.628
EFL39932.1
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
  
 0.537
EFL41789.1
Cyclase/dehydrase.
    
 
 0.453
EFL39940.1
glutamyl-tRNA reductase (GluTR).
     
 0.446
EFL38230.1
Glycosyl transferase, family 9.
   
 
 0.442
EFL41925.1
Methyltransferase domain-containing protein.
  
 
 
 0.441
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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