Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
EFL41663.1IclR family transcriptional regulator. (272 aa)    
Predicted Functional Partners:
EFL41554.1
Conserved hypothetical protein.
  
     0.749
EFL41664.1
Malonyl CoA-acyl carrier protein transacylase.
       0.702
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
     
  0.633
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
     
  0.633
EFL40068.1
crp/Fnr family transcriptional regulator.
  
  
 0.631
EFL40370.1
Integral membrane protein.
  
     0.530
EFL40827.1
Transcriptional regulator; Truncated CDS.
  
  
 0.526
EFL42506.1
Conserved hypothetical protein; Belongs to the D-glutamate cyclase family.
  
    0.526
EFL38654.1
Conserved hypothetical protein.
  
     0.520
EFL38674.1
Conserved hypothetical protein.
  
     0.494
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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