STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41669.1Beta-lactamase; Truncated CDS. (272 aa)    
Predicted Functional Partners:
EFL42213.1
YzbB.
    0.978
EFL41258.1
beta-N-Acetylglucosaminidase.
 
 0.966
EFL38484.1
Sugar hydrolase.
 
 0.953
EFL37402.1
Beta-lactamase.
  
     0.691
EFL41668.1
bcr/CflA family drug resistance transporter.
       0.644
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
    0.631
EFL37479.1
Secreted protein.
 
     0.559
EFL38025.1
LD-carboxypeptidase superfamily protein.
 
     0.517
EFL41667.1
Oxidoreductase.
       0.499
EFL39616.1
GMP synthase.
     
 0.492
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.