STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41675.1Membrane protein. (293 aa)    
Predicted Functional Partners:
EFL41677.1
Lipoprotein.
  
 0.999
EFL41676.1
Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.987
EFL40449.1
Tat-translocated enzyme; Truncated CDS; unextendable partial coding region.
 
  
 0.939
EFL41674.1
Conserved hypothetical protein.
       0.870
EFL39367.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.759
EFL41678.1
PhzF family phenazine biosynthesis protein.
  
    0.750
EFL42135.1
Ferric enterobactin transport ATP-binding protein.
   
  
 0.662
EFL43134.1
iron(III) dicitrate transport system, ATP-binding protein FecE.
   
  
 0.662
EFL43301.1
Iron ABC transporter, ATP-binding protein.
   
  
 0.662
EFL39615.1
Pyridoxamine 5-phosphate oxidase, FMN-binding.
   
    0.660
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.