STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41686.1LuxR family transcriptional regulator. (206 aa)    
Predicted Functional Partners:
EFL41687.1
Conserved hypothetical protein.
  
 0.985
EFL38500.1
Transcriptional regulator RedD.
 
  
 0.814
EFL38501.1
Regulatory protein DnrI.
 
    0.764
EFL40255.1
Regulatory protein AfsR.
 
  
 0.699
EFL38049.1
NAD-dependent deacetylase 2.
  
    0.582
EFL37326.1
Regulatory protein AfsR.
 
  
 0.547
cobB-2
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.527
EFL38505.1
Transcriptional regulator RedD.
  
  
 0.454
EFL38196.1
Transcriptional regulator.
  
    0.451
EFL40806.1
Regulatory protein AfsR.
  
  
 0.434
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (24%) [HD]