STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41687.1Conserved hypothetical protein. (634 aa)    
Predicted Functional Partners:
EFL41686.1
LuxR family transcriptional regulator.
  
 0.985
EFL38500.1
Transcriptional regulator RedD.
 
  
 0.947
EFL40255.1
Regulatory protein AfsR.
 
  
 0.794
EFL38501.1
Regulatory protein DnrI.
 
    0.635
EFL38049.1
NAD-dependent deacetylase 2.
   
    0.527
cobB-2
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.527
EFL37326.1
Regulatory protein AfsR.
 
  
 0.514
EFL40806.1
Regulatory protein AfsR.
  
  
 0.478
EFL38196.1
Transcriptional regulator.
  
    0.457
EFL38505.1
Transcriptional regulator RedD.
  
  
 0.446
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.