STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41689.1Antibiotic resistance ATP-binding protein. (338 aa)    
Predicted Functional Partners:
EFL41688.1
ABC-transporter, transmembrane component.
 
 0.987
EFL39474.1
ABC transporter, permease component.
 
 0.868
EFL42192.1
ABC transporter, permease component.
 
 
 0.868
EFL40015.1
ABC-2 type transporter.
 
 0.865
EFL37365.1
Daunorubicin resistance transmembrane protein.
 
 0.864
EFL40316.1
Daunorubicin resistance transmembrane protein.
  
 0.861
EFL41658.1
Multidrug ABC transporter permease.
 
 
 0.857
EFL39896.1
ABC transporter, permease.
 
 
 0.840
EFL39071.1
ABC transporter, integral membrane subunit.
  
 
  0.805
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.708
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.