STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41693.1Membrane protein. (188 aa)    
Predicted Functional Partners:
EFL40636.1
Conserved hypothetical protein; Unextendable partial coding region.
    
   0.783
EFL41776.1
Aminotransferase, class V protein.
    
   0.783
EFL42006.1
SufS family cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.783
EFL42055.1
Class V superfamily aminotransferase.
    
   0.783
EFL43155.1
Cysteine desulfurase.
    
   0.783
EFL37481.1
PTS system, IIBC component.
    
 0.714
EFL41711.1
Alpha-amylase.
  
 
 0.655
EFL41692.1
TetR family transcriptional regulator.
       0.543
EFL40415.1
NUDIX family hydrolase.
  
     0.487
EFL41372.1
Rod shape-determining protein MreD.
  
     0.477
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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