STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41704.1Integral membrane protein. (291 aa)    
Predicted Functional Partners:
EFL41705.1
HTH-type transcriptional regulator MalR.
       0.768
EFL42955.1
Conserved hypothetical protein.
  
     0.649
EFL42256.1
Ferredoxin.
  
     0.614
EFL39936.1
Regulatory protein.
  
     0.552
EFL41706.1
Maltose-binding protein.
       0.552
EFL41707.1
Maltose permease.
       0.552
EFL41708.1
Maltose permease.
       0.552
EFL40817.1
Integral membrane protein.
 
     0.546
EFL37560.1
ErfK/YbiS/YcfS/YnhG superfamily protein.
  
     0.496
EFL42232.1
Conserved hypothetical protein.
  
     0.469
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.