STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41709.1Alpha-amylase. (420 aa)    
Predicted Functional Partners:
EFL39012.1
Pep2 protein.
 0.992
EFL37634.1
Pep2 protein.
 0.912
EFL37816.1
Alpha-galactosidase C.
 
 
 0.887
EFL41335.1
4-alpha- glucanotransferase/amylomaltase/disproportionating enzyme.
  
 
 0.887
EFL37481.1
PTS system, IIBC component.
  
 
 0.859
EFL38805.1
Beta-glucosidase.
   
 
 0.837
EFL42884.1
beta-D-xylosidase; Truncated CDS; unextendable partial coding region.
   
 
 0.837
EFL41963.1
Fructokinase.
 
  
 0.826
EFL42887.1
Alpha-amylase.
 
  
 0.825
EFL41711.1
Alpha-amylase.
 
 
0.813
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.