STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41744.1Regulatory protein GntR, HTH. (207 aa)    
Predicted Functional Partners:
EFL38678.1
Transcriptional regulator.
  
     0.774
EFL40635.1
GntR family transcriptional regulator.
  
  
 0.769
EFL37406.1
GntR family transcriptional regulator.
  
     0.767
EFL42112.1
GntR family transcriptional regulator.
  
  
 0.758
EFL38424.1
GntR family transcriptional regulator.
  
  
 0.754
EFL37768.1
L-asparagine operon repressor (GntR family).
  
  
 0.741
EFL42508.1
GntR family transcriptional regulator.
  
     0.734
EFL41745.1
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase.
     
 0.730
EFL38539.1
GntR family transcriptional regulator.
  
    0.720
EFL38062.1
GntR family transcriptional regulator.
  
  
 0.717
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.