STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41750.1Methyltransferase type 12. (424 aa)    
Predicted Functional Partners:
EFL42076.1
Magnesium chelatase.
  
 0.732
EFL38475.1
Serine/threonine protein phosphatase.
 
 
   0.664
EFL41751.1
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
     
 0.608
EFL38968.1
ATP/GTP binding protein.
   
   0.603
EFL42955.1
Conserved hypothetical protein.
   
   0.603
EFL38465.1
anthraniloyl-CoA monooxygenase.
 
 
 0.589
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
     
 0.557
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
     
 0.557
EFL38312.1
Macrolide glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
       0.552
EFL37436.1
Conserved hypothetical protein.
    
 
 0.528
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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