STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41754.1Integral membrane protein. (225 aa)    
Predicted Functional Partners:
EFL41753.1
Methyltransferase.
       0.829
EFL41732.1
Integral membrane protein.
 
     0.790
EFL38654.1
Conserved hypothetical protein.
  
     0.761
EFL42531.1
MerR family transcriptional regulator.
  
     0.758
rbpA-2
Membrane-associated GTPase; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.752
EFL41755.1
Transcription regulator.
       0.742
EFL38649.1
Conserved hypothetical protein.
  
     0.728
EFL41843.1
Integral membrane protein.
  
     0.723
EFL41756.1
Conserved hypothetical protein.
       0.714
EFL41304.1
Single-stranded DNA-binding protein 2.
  
     0.697
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.