STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41756.1Conserved hypothetical protein. (94 aa)    
Predicted Functional Partners:
EFL41755.1
Transcription regulator.
 
     0.958
EFL41727.1
Conserved hypothetical protein.
 
     0.791
EFL41757.1
Two-component system sensor kinase.
       0.778
EFL41758.1
Two-component system response regulator.
       0.753
EFL39366.1
Conserved hypothetical protein.
  
     0.736
EFL42393.1
Membrane protein.
  
     0.734
EFL41754.1
Integral membrane protein.
       0.729
EFL41161.1
Conserved hypothetical protein.
  
     0.702
EFL38915.1
Membrane protein.
  
     0.700
EFL41759.1
AcrB/AcrD/AcrF family transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.695
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.