STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41759.1AcrB/AcrD/AcrF family transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1048 aa)    
Predicted Functional Partners:
EFL42420.1
Secreted protein.
    
 
 0.914
EFL42867.1
SecD/SecF/SecDF export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
 
 
 0.849
EFL41758.1
Two-component system response regulator.
  
    0.765
EFL41757.1
Two-component system sensor kinase.
       0.741
EFL41756.1
Conserved hypothetical protein.
       0.695
EFL41755.1
Transcription regulator.
       0.679
EFL43051.1
Membrane protein.
    
 0.662
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
   
 
 0.580
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
 
 
 
 0.549
EFL38903.1
Membrane protein.
  
 
 
 0.456
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.