STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
nadAQuinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (397 aa)    
Predicted Functional Partners:
EFL39989.1
L-aspartate oxidase (LASPO) (Quinolinate synthetase B).
 
 0.999
EFL39988.1
Nicotinate-nucleotide diphosphorylase; Belongs to the NadC/ModD family.
 
 
 0.998
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
    0.801
EFL41761.1
HesB/YadR/YfhF family protein; Belongs to the HesB/IscA family.
     
 0.754
EFL38697.1
DNA hydrolase with MutT domain-containing protein; Belongs to the Nudix hydrolase family.
  
  
 0.750
EFL42152.1
MutT/nudix family DNA hydrolase.
  
  
 0.750
EFL40561.1
Riboflavin/cytosine deaminase.
  
  
 0.721
EFL41765.1
Cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent; Belongs to the sulfur carrier protein TusA family.
 
  
 0.676
EFL39325.1
FAD flavoprotein oxidase.
    
 0.645
EFL39562.1
Succinate dehydrogenase, flavoprotein subunit.
    
 0.645
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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