STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41761.1HesB/YadR/YfhF family protein; Belongs to the HesB/IscA family. (118 aa)    
Predicted Functional Partners:
EFL42007.1
NifU family SUF system FeS assembly protein.
  
 
 0.936
EFL37526.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
  
 
 0.901
EFL40626.1
Glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family.
 
 
 0.901
EFL38957.1
Aminotransferase, class V.
 
 
 0.877
EFL41765.1
Cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent; Belongs to the sulfur carrier protein TusA family.
 
 
 0.876
EFL42005.1
FeS assembly ATPase SufC.
  
 
 0.766
EFL39170.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
  
  
 0.760
nadA
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
     
 0.754
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 0.704
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 0.704
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.