STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41761.1HesB/YadR/YfhF family protein; Belongs to the HesB/IscA family. (118 aa)    
Predicted Functional Partners:
EFL42007.1
NifU family SUF system FeS assembly protein.
  
  
 0.951
EFL40626.1
Glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family.
 
 
 0.902
EFL37526.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
  
 
 0.861
EFL38036.1
Conserved hypothetical protein.
    
 
 0.853
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.831
EFL38957.1
Aminotransferase, class V.
 
  
 0.815
EFL41765.1
Cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent; Belongs to the sulfur carrier protein TusA family.
 
  
 0.814
EFL38200.1
Conserved hypothetical protein.
    
 
 0.804
EFL42005.1
FeS assembly ATPase SufC.
  
 
 0.795
EFL37935.1
Conserved hypothetical protein.
    
 
 0.791
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.