STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41777.1Transcription regulator protein. (93 aa)    
Predicted Functional Partners:
EFL41778.1
Integral membrane protein.
       0.807
EFL41779.1
Conserved hypothetical protein.
       0.773
EFL41780.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
       0.719
EFL42362.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.664
EFL41781.1
Secreted protein.
       0.654
EFL41782.1
Secreted protein.
       0.624
EFL38676.1
GNAT family acetyltransferase.
 
  
  0.552
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.531
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.531
EFL42652.1
TetR-family transcriptional regulator.
  
   
 0.477
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.