STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41780.1Conserved hypothetical protein; Truncated CDS; unextendable partial coding region. (320 aa)    
Predicted Functional Partners:
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.835
mshC
Conserved hypothetical protein; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.
  
    0.835
EFL41779.1
Conserved hypothetical protein.
       0.796
EFL42623.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.749
EFL40019.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.745
EFL41941.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.741
EFL37990.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.740
EFL41781.1
Secreted protein.
       0.740
EFL37500.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.738
EFL43108.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.737
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.